Bachelor degree



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Module designation


Module 3. Cell Biology and Basics of Physiology

Basics of Microorganisms Physiology



Module level, if applicable


Basic Professional Modules

Code, if applicable


BMF 2311

Subtitle, if applicable


not applicable

Courses, if applicable


Course

Credits

Basics of Microorganisms Physiology

3




2 lectures + 1 seminar / week

Semester(s) in which the module is taught


4 semester

Person responsible for the module


Dr., Professor Mukasheva T.D.

Lecturer


Dr., Professor Mukasheva T.D.

associate Professor, candidate of Biological Science Berzhanova R.Zh., associate Professor, candidate of Biological Science Kistaubaeva A.S.



Language


Russian, Kazakh, English

Relation to curriculum


(State/Social/ Vocational/IET)

Vocational Modules





Type of teaching, contact Hours


Lecture

Practicum

Seminars

30 hours per semester

2 hours per week



15 hours per semester

1 hour per week










Workload


Lectures

Guided self-study

Self-study

30 hours per semester

2 hours per week






60 hours per semester

4 hours per week



Credit points


3 US credit = 5 ECTS


Requirements according to

the examination regulations


50% of overall scores

Recommended prerequisites


MV 1407 Microbiology and Virology


Module objectives/intended

learning outcomes



Knowledge


Skills


Competences


As a result of the discipline, students will know: the pathways of the nutrients into the cell, types of the power of microorganisms, methods of cultivation of microorganisms;

Remember

- Remember the basic biochemical and physiological functions of a microbial cell that allow survival and growth;

- Remember the different biochemical and physiological functions are integrated, coordinately regulated, and expressed within the cell.

Understand

- Understand and explain the basic procedures used in studying microbial physiology.




Have the skills to work with pure cultures of microorganisms used in biotechnology.

Apply

- Apply your knowledge of microbial physiology to solve scientific or environmental problems.



Analysis

- Analysis the incredible metabolic diversity found in microorganisms that permits them to occupy diverse ecological niches and how this metabolic diversity contributes to growth and survival.



Be able to: use knowledge about the needs of micro-organisms in the matter, laws of growth and development at various ways of cultivation.

Evaluate

Use logical reasoning

in microbial physiology, microbial cell biology and the techniques used to study microbial physiology. 
Create

Create of isolate an organism that degrades a xenobiotic compound and characterize the biochemical pathway for the metabolism of that compound in that organism.



Content


The course "Fundamentals of Physiology of Microorganisms," introduces students to the scientific basics of microorganisms’ cultivation and biochemical basis of their metabolic processes to produce the desired metabolites.

The course will cover the following topics:



  1. The chemistry of microbes

  2. Microbial Metabolism. Catabolic and Anabolic Reactions. Enzymes. Energy Production.

  3. Carbohydrate Metabolism. A Summary of Energy Production Mechanisms. Metabolic Diversity among Organisms.

  4. Microbial Nutrition. The common nutrient requirements. Nutritional types of microorganisms. Growth factors.

  5. Microbial Growth. The Requirements for Growth. Culture Media. Obtaining Pure Cultures. The Growth of Bacterial Cultures.

  6. Microbial physiology - factors influencing the growth of microbes.

Study and examination

requirements and forms of

examination

Written exam and oral exam, tests

1st interim control: attendance, in-class discussion, problem solving, testing

2nd interim control: attendance, in-class discussion, problem solving, testing

Final examination: written, 2 theoretical questions, 1 practical question



Media employed


Video lectures, Power Point Presentations

Electronic books and scientific journals



Reading list


1. Abramson, J.; Smirnova, I.; Kasho, V.; Verner, G.; Kaback, H. R.; and Iwata, S. 2003. Structure and mechanism of the lactose permease of Escherichia coli. Science 301: P. 610–615. (in english)

2. Becton, Dickinson and Co. 2005. Difco and BBL manual: Manual of microbiological culture media, 1st ed., Franklin Lakes, NJ: BD. (in english)

3. Davidson, A. L., and Chen, J. 2004. ATP-binding cassette transporters in bacteria.

4. Bartlett, D. H., and Roberts, M. F. 2000. Osmotic stress. In Encyclopedia of microbiology, 2d ed., vol. 3, J. Lederberg, editor-in-chief, P. 502–515. San Diego: Academic Press. (in english)

5. Cavicchioli, R., and Thomas, T. 2000. Extremophiles. In Encyclopedia of microbiology, 2d ed., vol. 2, J. Lederburg, editor-in-chief. - P. 317–337. San Diego: Academic Press.





Module designation


Module 3. Cell Biology and Basics of Physiology

Basics of Animal Physiology




Module level, if applicable


Basic Professional Modules

Code, if applicable


BAF 2311

Subtitle, if applicable


-

Courses, if applicable


Course

Credits

Basics of Animal Physiology


3







Semester(s) in which the module is taught


4 semester

Person responsible for the module


Dr., Professor Tormanov N.T.



Lecturer


Dr., Professor Tormanov N.T. , associate Professor, candidate of Biological Science Srailova G.T., associate Professor Baktybaeva L.K.

Language


Russian, Kazakh, English

Relation to curriculum


(State/Social/ Vocational/IET)

Vocational



Type of teaching, contact Hours


Lecture

Practicum

Seminars

30 hours per semester

2 hours per week



15 hours per semester

1 hour per week




-




Workload


Lectures

Guided self-study

Self-study

30 hours per semester (2 hours per week)

-

60 hours per semester (4 hours per week)

Credit points


3 credits (135 hrs)

Requirements according to

the examination regulations


50% of scores

Recommended prerequisites


BA 1406 Biodiversity of Animals

Module objectives/intended

learning outcomes



Knowledge


Skills


Competences


theoretical and methodological bases of animal physiology; the mechanisms providing interaction of separate parts of an organism and an organism as whole with environment; about achievements, prospects of development of physiology and its practical application.


to own methods of an assessment of a functional condition of an organism of animals.

to apply the received knowledge and skills to development of new biotechnological methods and receptions of management by organism functions.


Content


The discipline gives an idea of processes of activity of an animal organism and parts making it in their unity and interrelation with environment.

Study and examination

requirements and forms of

examination

Oral exam, tests

1st interim control: attendance, in-class discussion, problem solving, testing

2nd interim control: attendance, in-class discussion, problem solving, testing

Final examination: written, 2 theoretical questions, 1 practical question

Intermediate control of knowledge: control work (in written form), colloquium (in oral form) and test


Media employed


Video lectures, Audio books, presentations

Reading list


  1. Tormanov N.T. Animal and Human physiology. Almaty. 2009, 321 p. (in Russian, in Kazakh)

  2. Nosov V.N. Animal Physiology. Moscow. 2004. 278 p. (in russian)




Module designation


Module 3. Cell Biology and Basics of Physiology

Basics of Plant Physiology



Module level, if applicable


Basic Professional Modules

Code, if applicable


BPF 2311

Subtitle, if applicable


-

Courses, if applicable


Course

Credits

Basics of Plant Physiology

3




2 lectures+1 Lab

Semester(s) in which the module is taught


4 semester

Person responsible for the module

Dr., Professor Atabaeva S.Zh.

Dr., Professor Kenzhebaeva S.S.



Lecturer


Dr., Professor Atabaeva S.Zh.

Dr., Professor Kenzhebaeva S.S.



Language


Russian, Kazakh, English

Relation to curriculum


Vocational

Type of teaching, contact Hours


Lecture

Practicum

Seminars

30 hours per semester

2 hours per week



15 hours per semester

1 hour per week




-




Workload


Lectures

Guided self-study

Self-study

30 hours per semester (2 hours per week)

-

60 hours per semester (4 hours per week)

Credit points


3 credits (135 hrs)

Requirements according to

the examination regulations


50% of overall scores

Recommended prerequisites


Biodiversity of Plants

Module objectives/intended

learning outcomes



Knowledge


Skills


Competences


theoretical and methodological foundations of Plant Physiology - the science of the main manifestations of plant life and their regulation; mechanisms for the interaction of plant parts and whole plant organism with the environment; the achievements, prospects of plant physiology and its practical application.

Remember

1 Peculiarities of plant cells structure

2. Photosynthesis equation

3. Photosynthesis phases

4. Electron transport chain

5. Respiration equation

6. Phases of Glycolysis

7. Triad of Selye



Understand

1. Laws of osmosis

2.Light and dark phases of photosynthesis

3. Photorespiration

4. Types CO2 assimilation

6. Respiration process

5. Glyoxylate cycle

6. Embryogenesis process

7. Mineral nutrition process

8. Phases of development

9. Stress physiology


Students be able to: apply their knowledge and skills to develop new biotechnological methods and techniques of control of bodily functions;

-must be able to apply this knowledge to laboratory work;

-must master the methods to assess the functional state of the plants.

Apply

Their knowledge on the structure and function of plant cells for understanding all the vital processes of the plant

Methods for assessing the functional state of the plant organism

Their knowledge to perform experiments to study the basic physiological processes

Apply knowledge and skills for developing new biotechnological methods and techniques of management functions of the plant organism

Analysis

1. Function of transmembrane transport system under different conditions

2. Water status of plant cell under different conditions

3. Advantages and limitations of different types of CO2 assimilation

4. Functions of different organells and physiological processes under unfavorable conditions


to know the main manifestations of life and their regulation, mechanisms and patterns of activity of the autonomic functions of the plant, mechanisms for the interaction of plant parts and a whole plant with the environment, the achievements and prospects for development of physiological science and its practical application.

Evaluate

1. Evaluate effects of different factors on water status of plant cells

2. The rate of photosynthesis, respiration and mineral composition of plants

3. Evaluate

the functional state of plant at different environmental conditions

Create

1. Presentations on regularities of physiological processes

2. Models of unfavorable environmental condition to evaluate physiological processes




Content


The course of “Basic physiology of plants” include: structure and function of plant cell organelles, the nature and mechanisms of the light and dark phases of photosynthesis, the way the oxidation of respiratory substrates, photosynthetic and oxidative phosphorylation, the physiological role of mineral elements and their metabolism in plants, mechanisms for delivering the cell and movement water through the plant, mineral elements, patterns of plant growth and development, physiological bases of plant resistance

Peculiarities of the plant cell structure


Water exchange of plants

Photosynthesis. The photosynthetic apparatus of plants

Photosynthesis. Light stage of photosynthesis

Photosynthesis

The dark stage of photosynthesis

Respiration. Redox reactions. Glycolysis. Krebs cycle

Pentose phosphate pathway

Doctrine of mineral nutrition. Ways of nitrogen assimilation in plants

Plant cell ontogeny. Plant growth and developmen. Embryogenesis

Stages of development of higher plants

Stress physiology. Physiology of plant resistance to drought
Physiology of plant tolerance to salinity



Study and examination

requirements and forms of

examination

Oral exam, tests

Final examination: written, 2 theoretical questions, 1 practical question

Current control: tests, project work in small groups, essays


Media employed


Video lectures, Audio books, presentations

Reading list


  1. Kalekenov K. Plant physiology. Almaty, 2008, 343 p. (in Kazakh)

  2. Polevoi V. Plant physiology. Moscow, 1996, 274 p. (in Russian)

  3. Nechaev A.P. Chemistry. St. Petersburg, 2007 (in russian)

  4. Drozdova T.M., Vlyuschensky P.B., Poznyakovsky V.M. Physiology of plant nutrition. Novosibirsk 2007 (in russian)


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