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In Nature-Aided-Drug-Discovery process, compound structure determination and extract dereplication are crucial and extremely time-consuming steps. To speed up the research in the field of natural compounds, the interdisciplinary team coordinated by Cottrell and Gerwick recently developed a tool called the Small Molecule Accurate Recognition Technology (SMART) [3]. The SMART tool uses a piece of spectral data which is unique and characteristic to each molecule, and runs it through a deep learning neural network to place the unknown molecule in a cluster of molecules with similar structures. In more detail, the HSQC-NMR of each compound produces a topological map of spots, and the Convolutional Neural Network (CNN) learning system takes the images of spectra of unknown molecules and maps them into a ten-dimensional space near molecules with similar traits. As the Authors stated, it is possible to associate and integrate biological, pharmacological, and ecological data with SMART, and thereby create new tools for enhanced discovery and development of biologically active natural products. Of note, SMART is not a “closed system”, and the continuous, further addition of compounds to the training set will improve accuracy and robustness of the system, thus accelerating natural product structural elucidation

  • In Nature-Aided-Drug-Discovery process, compound structure determination and extract dereplication are crucial and extremely time-consuming steps. To speed up the research in the field of natural compounds, the interdisciplinary team coordinated by Cottrell and Gerwick recently developed a tool called the Small Molecule Accurate Recognition Technology (SMART) [3]. The SMART tool uses a piece of spectral data which is unique and characteristic to each molecule, and runs it through a deep learning neural network to place the unknown molecule in a cluster of molecules with similar structures. In more detail, the HSQC-NMR of each compound produces a topological map of spots, and the Convolutional Neural Network (CNN) learning system takes the images of spectra of unknown molecules and maps them into a ten-dimensional space near molecules with similar traits. As the Authors stated, it is possible to associate and integrate biological, pharmacological, and ecological data with SMART, and thereby create new tools for enhanced discovery and development of biologically active natural products. Of note, SMART is not a “closed system”, and the continuous, further addition of compounds to the training set will improve accuracy and robustness of the system, thus accelerating natural product structural elucidation

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